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Git and Vim for Notes
It's no fun looking for a good note-taking program for school since so many of them seem to just kinda succ. The good thing however is that you don't really need a good note taking program like you need a good text editor. In case you haven't yet considered it, I'll show you how you can make your favorite text editor the comfiest note taker out there. Of course I want to also show you how to get your stuff synced between multiple devices, because that's also super useful.
Editing, Syncing, File Formats Galore
In my case vim is my go-to editor that I use for basically everything. This is partly due to the fact that I am just efficient using it and partly that I have some plugins which make it super nice for basically every type of text editing that I could ever want or need.
There's all sorts of plugins for vim that you can find out in the ether. Utilities like spell-checkers, auto-complete, and in the case of this post, Goyo, a special plugin to make vim more distraction free to focus on your work.